refactor(rebrand): rename & rebrand CI → CIAgent across all source and test files

- Type renames: CIConfig → CIAgentConfig, DEFAULT_CI_CONFIG → DEFAULT_CIAGENT_CONFIG
- Type renames: CiMetadata → CIAgentMetadata, ParsedCiCommit → ParsedCIAgentCommit
- Function renames: initCI → initCIAgent, isCIInitialized → isCIAgentInitialized
- Function renames: extractCiBlock → extractCIAgentBlock, parseCiBlock → parseCIAgentBlock
- Class renames: CiFiles → CIAgentFiles
- Import paths: ci-files.js → ciagent-files.js
- Directory paths: .ci/ → .ciagent/ across all source and test files
- Check names: ".ci directory exists" → ".ciagent directory exists"
- Check names: "CI config valid" → "CIAgent config valid"
- Temp dir names: ci-*-test- → ciagent-*-test-
- CLI examples: "ci init" → "ciagent init"
- Fix deepMerge infinite recursion bug in config.ts
- ---ci---/---/ci--- block markers preserved unchanged
- All 31 test suites, 370 tests passing

---ci---
phase: 1
milestone: v0.5
plan: 07
task: 07-01-01
status: execute
---/ci---

src/agents/orchestrator.ts

@@ -4,9 +4,9 @@ import { ClarifyPhase } from "../core/clarify.js";
 import { EscalationProtocol, EscalationInput } from "../core/escalation.js";
 import { GitContext, ProjectState } from "../core/git-context.js";
 import { GitBranch } from "../core/git-branch.js";
-import { CiFiles } from "../core/ci-files.js";
+import { CIAgentFiles } from "../core/ciagent-files.js";
 import { CommitBuilder } from "../core/commit-builder.js";
-import { CIConfig, AgentName } from "../types/config.js";
+import { CIAgentConfig, AgentName } from "../types/config.js";
 import {
   PipelineState,
   PipelineStage,
@@ -16,29 +16,29 @@ import {
   STAGE_ORDER,
 } from "../types/pipeline.js";
 import { Specification, parseSpecification } from "../types/specification.js";
-import { loadConfig, saveConfig, isCIInitialized, initCI } from "../core/config.js";
+import { loadConfig, saveConfig, isCIAgentInitialized, initCIAgent } from "../core/config.js";
 import { getAgent } from "./index.js";
 import { IntelligenceBackend, BackendUnavailableError } from "../backends/types.js";
 
 export interface GitAgentContext extends AgentContext {
   gitContext: GitContext;
   gitBranch: GitBranch;
-  ciFiles: CiFiles;
+  ciFiles: CIAgentFiles;
   milestone: string;
 }
 
 export class OrchestratorAgent extends BaseAgent {
   readonly name: AgentName = "orchestrator";
-  readonly description = "Top-level autonomous controller that coordinates the full CI pipeline";
+  readonly description = "Top-level autonomous controller that coordinates the full CIAgent pipeline";
   readonly workflow = "run";
 
-  private config: CIConfig;
+  private config: CIAgentConfig;
   private pipelineState: PipelineState | null = null;
   private decisionEngine: DecisionEngine | null = null;
   private escalationProtocol: EscalationProtocol | null = null;
   private gitContext: GitContext | null = null;
   private gitBranch: GitBranch | null = null;
-  private ciFiles: CiFiles | null = null;
+  private ciFiles: CIAgentFiles | null = null;
   private currentMilestone: string;
   private phaseResults: PhaseResult[] = [];
 
@@ -46,10 +46,11 @@ export class OrchestratorAgent extends BaseAgent {
     research: "researcher",
     plan: "planner",
     execute: "executor",
+    test: "tester",
     verify: "verifier",
   };
 
-  constructor(config?: CIConfig) {
+  constructor(config?: CIAgentConfig) {
     super();
     this.config = config || loadConfig(process.cwd());
     this.currentMilestone = "v1.0";
@@ -57,14 +58,14 @@ export class OrchestratorAgent extends BaseAgent {
 
   async execute(context: AgentContext): Promise<AgentResult> {
     const startTime = Date.now();
-    this.log("Starting CI Orchestrator pipeline (git-native)");
+    this.log("Starting CIAgent Orchestrator pipeline (git-native)");
 
     try {
       this.config = loadConfig(context.project_path);
 
       this.gitContext = new GitContext(context.project_path);
       this.gitBranch = new GitBranch(context.project_path);
-      this.ciFiles = new CiFiles(context.project_path);
+      this.ciFiles = new CIAgentFiles(context.project_path);
       this.ciFiles.ensureCIDir();
 
       const projectState = this.gitContext.reconstructState();
@@ -207,7 +208,7 @@ export class OrchestratorAgent extends BaseAgent {
           });
 
           this.log("Init commit prepared with specification in ---ci--- block");
-          artifactsCreated.push(".ci/config.json");
+          artifactsCreated.push(".ciagent/config.json");
 
           if (this.config.git.auto_commit && this.gitContext!.isGitRepo()) {
             try {
@@ -296,7 +297,7 @@ export class OrchestratorAgent extends BaseAgent {
             1,
             this.currentMilestone,
             "initial domain research",
-            ["Research completed. Key findings in .ci/ARCHITECTURE.md and .ci/PROJECT.md updates."]
+            ["Research completed. Key findings in .ciagent/ARCHITECTURE.md and .ciagent/PROJECT.md updates."]
           );
           try {
             const { execSync } = await import("node:child_process");
@@ -310,7 +311,7 @@ export class OrchestratorAgent extends BaseAgent {
         }
 
         this.pipelineState!.research_completed = true;
-        artifactsCreated.push(".ci/ARCHITECTURE.md");
+        artifactsCreated.push(".ciagent/ARCHITECTURE.md");
         break;
       }
 
@@ -425,7 +426,7 @@ export class OrchestratorAgent extends BaseAgent {
 
   private generateCompletionReport(): string {
     const lines: string[] = [
-      "# CI Completion Report",
+      "# CIAgent Completion Report",
       "",
       `✓ Pipeline completed successfully (git-native)`,
       "",